Available codes

Ab initio codes developed within the ETSF cover a wide field of application ranging from molecules and nano-scale clusters to 1D, 2D and 3D extended systems. The physical quantities provided by these programs include:

  • ground-state electronic density and total energy from density functional theory (DFT);
  • quasi-particle energy within the GW approximation and its extensions;
  • linear and non-linear response functions.

Through these physical quantities, a large variety of physical properties can be addressed:

  • structural and vibrational properties;
  • electronic properties;
  • optical and dielectric properties;
  • magnetic properties.

Clicking on the logos will bring you to the (external) websites of the codes.

abinit-logo

ABINIT is an ab initio computational package based on pseudopotentials and using a plane-wave basis set. It is an implementation of density-functional theory (DFT) and density-functional perturbation theory (DFPT), but also of time-dependent density functional theory (TDDFT) in the Casida approach, and
many-body perturbation theory in the GW approximation.

Main purposes:

  • Calculate total energy, charge density and electronic structure of a huge range of systems (molecules and clusters, wires and tubes, surfaces and periodic solids);
  • Optimize geometries according to the DFT forces and stresses, perform molecular dynamics simulations using these forces, or generate dynamical matrices, Born effective charges, and dielectric tensors;
  • Excited states can be computed within TDDFT or GW.

dp logo

The DP code is an ab initio linear response TDDFT code implemented on a plane-wave basis set and NC pseudopotentials. It works in the frequency domain calculating in real space the basic quantities (the Kohn-Sham polarizability and the exchange-correlation kernel) and solving the fundamental TDDFT equations in reciprocal space. The approximations range from the most used RPA and TDLDA, to non-local (and/or non-adiabatic) kernels. Bulk systems are particularly well suited, but the code can be applied also to surfaces, 1D (tubes, wires) and 0D (clusters, molecules) systems.

Main purposes:

  • Calculate EELS (Electron Energy-Loss Spectroscopy)
  • IXSS (Inelastic X-ray Scattering Spectroscopy) at large transferred momentum Q
  • Optical properties

exc-logo

EXC is an ab initio Bethe-Salpeter Equation code working in reciprocal space, in the frequency domain, and using a plane-wave basis set. Its purpose is to calculate dielectric and optical properties, like

  • optical absorption, reflectivity, refraction index
  • EELS (Electron Energy-Loss Spectroscopy)
  • IXSS (Inelastic X-ray Scattering Spectroscopy)

It can be used on a large variety of systems, ranging from bulk systems, surfaces, to clusters or atoms (using the supercell method). Full coupling (beyond Tamm-Dancoff approximation) calculations are possible, as well as the possibility to speed up using the Haydock iterative scheme.

octopus

The Octopus code solves the TDKS equation in a non-perturbative way. Its central part is the propagation
of the TDKS orbitals in real time and real space. It is therefore particularly geared to the calculation of
nonlinear (and of course also linear) optical properties.

It also allows for the classical motion of ions and it includes (low-order) relativistic effects. The code currently works for finite systems (including biomolecules in QM/MM). The implementation for systems periodic in one dimension and finite in the two other dimensions (i.e. polymers) is nearly completed. The implementation for 3D periodic solids and the calculation of transport properties are currently the main code development activities.

  • linear and nonlinear optical properties
  • Raman, IR and other vibrational spectroscopies
  • optical and magnetic dichroism
  • non-adiabatic electron-ion dynamics
  • QM/MM schemes for biophysical processes
  • quantum dots in 2D: magentic field effects
  • transport in 1D

TOSCA

TOSCA is a package for computing optical spectra of solids in the IP-RPA approximation. The full power of TOSCA is revealed when studying complex systems like surfaces or clusters.

The kernel of TOSCA is formed by a set of Fortran routines that allow an ab initio non-SCF calculation by diagonalizing the Kohn-Sham hamiltonian using one of the following methods: full or partial diagonalization, diagonalization using the method of Lanczos, and Arnoldi diagonalization.

Once the eigenvalues and eigenvectors have been computed the following quantities can be computed by TOSCA:

  • Slab polarizability computed with or without real space cutoff, for insulators, semiconductors, metals. Surface epsilon can be also computed;
  • Localization of the wavefunctions for given k-point(s) and states;
  • Squared modulus of a wavefunction for a given k-point and state on the real space FFT grid. Interface with DataExplorer for graphical representation by isosurfaces;
  • RAS (Reflectance Anisotropy Spectra) or SDR (Surface Differential Reflectivity)

yambo-logo

Yambo is a code for performing many-body calculations in solid state and molecular physics. Yambo relies on the Kohn-Sham wavefunctions generated by two DFT public codes (abinit and PWscf), but can also utilize data written in the ETSF file format.

With the GPL version of Yambo you can calculate:

  • quasiparticle energies within the GW approximation
  • electron loss and optical absorption spectra of solids, and dynamical polarizability of molecules at different level of theory
    • Random Phase Approximation
    • Time Dependent Local Density Approximation
    • Bethe-Salpeter equation

Download codes binary packages

Installation packages

LiveCD

ETSF software distribution packaged as a bootable live CD. Comes with documentation and tutorials. Requires a pentium class computer with at least 512 MB memory.

  • (27/01/2009) Abinit updated to 5.6 due to license expiration.
  • (10/04/2009) Included V-sim application reported to be broken with some graphic cards.

View a ten-minute screencast to see how it works.

Applications

ABINIT

ABINIT is a package whose main program allows one to find the total energy, charge density and electronic structure of systems made of electrons and nuclei (molecules and periodic solids) within Density Functional Theory (DFT), using pseudopotentials and a planewave basis. Production version. Built for i686 Linux, OSX and Windows (32 bit)

DP

DP is a linear response time-dependent density functional theory code in frequency reciprocal space on a plane waves basis set to calculate dielectric and optical properties. New development release, optimized for i686 (32 bit)

EXC

EXC is an exciton code working in reciprocal space, frequency domain and using plane waves basis to calculate dielectric and optical properties. Optimized for i686 (32 bit)

Tosca

Tosca is a package for computing optical spectra of solids in the IP-RPA approximation able to study complex systems like surfaces or clusters, compiled for i386 (32 bit)

Octopus

Octopus is package aimed at the simulation of the electron-ion dynamics of finite systems under the influence of time-dependent electromagnetic fields. It has used to calculate linear and non-linear absorption spectra, harmonic spectra, laser induced fragmentation. Requires Sparskit 2.18. Optimized for i686 (32 bit)

fhi98PP

fhi98PP generates norm-conserving pseudopotentials of the Hammann and Troullier-Martins types, employing common parameterizations of the local-density approximation and generalized gradient approximations for exchange and correlation. Compiled for i586 (32 bit)

PSPConvert

PSPConvert is a conversion tool between fhi, cpi and ncpp pseudopotential file formats written in Python 2.4. Requires pygsl-0.9.3.

Yambo

Yambo performs Many-Body calculations in solid state and molecular physics, relying on the Kohn-Sham wavefunctions generated by two DFT Abinit and PWscf packages. This development release replaces the Self package (32 bit)

V_Sim

V_Sim visualizes atomic structures such as crystals, grain boundaries, ... either in .d3 or in plain text format. Built on CentOS 5 and Ubuntu 8.04 (32 bit)

Dependencies

Sparskit is a basic toolkit for sparse matrix computations by Yousef Saad. Required by Octopus. Built on CentOS 5 (32 bit)

PyGSL provides a python interface for the GNU scientific library GSL. Required by PSPConvert. Built on CentOS 5 (32 bit)

Installation procedure

  • For the individually installable files – minimum requirements: an Intel/AMD i686 class computer with 256 MB RAM and 100 MB free hard disk space / a recent Debian or Redhat Linux operating system.

    Most Linux variants come with some sort of installation management software namely dpkg for Debian (Knoppix, Ubuntu, …) and rpm for Redhat style distributions (Fedora, OpenSUSE, ...). From a terminal window, the packagename.rpm can be installed to a subdirectory in the /opt tree by invoking sudo rpm ‑ivh packagename.rpm. Running the yum utility may solve dependencies errors. Similarly, the packagename.deb will be installed by sudo dpkg ‑I packagename.deb and missing dependencies solved with apt‑get. Tar files contain relocatable binaries; uncompress with gzip or bzip2 utilities and install with tar.

  • For the ISO files – minimum requirements: an Intel/AMD i686 class computer with at least 512 MB RAM, mouse and graphic display.

    They contain a binary image of bootable Linux operating system with the ETSF software preinstalled in the /opt directory tree. After burning the .iso file to a CD(R or RW), the disk is inserted to cold boot the computer and is designed to automatically detect hardware components and to operate from RAM without installing anything on the user hard disk.